Unlocking Methylation: The 5 Hidden Cycles Behind Energy, Mood, Detox, and Disease

Apr 21, 2025By Functional Medicine Consulting
Functional Medicine Consulting

If you have ever struggled with fatigue, anxiety, depression, hormone imbalance, brain fog, or sluggish detox, you’ve likely been told to eat better, take some B vitamins, test your hormones, or take some medication. And around and around you go.

But what if the real issue lies upstream? What if there’s a system that connects all of those issues at the cellular level that you’ve never even heard of? Welcome to the Methylation Network.

What Is Methylation?

Methylation is a biochemical process that happens over a billion times per second in every cell in your body. It’s how your body adds tiny chemical tags (called methyl groups) to DNA, hormones, neurotransmitters, and more.

This simple act of “tagging” controls:🧬

👉 How your genes are expressed
👉 How neurotransmitters are produced and broken down
👉 How toxins are neutralized and excreted
👉 How hormones are metabolized
👉 How your immune system regulates inflammation
👉 How your mitochondria generate energy

And yet… methylation dysfunction is one of functional medicine's most overlooked root causes.

Methylation Is More Than One Pathway

Most people only hear about MTHFR or the folate cycle. But methylation is a network of 5 interconnected cycles regulating nearly every aspect of your biology. Let me introduce them.

The 5 Interconnected Cycles of Methylation:

1. 💧The Urea Cycle: Clears ammonia and excess nitrogen from protein metabolism. It can cause fatigue, nausea, irritability, and ammonia buildup when impaired.

2. 🧠The BH4 (Neurotransmitter) Cycle: Produces serotonin, dopamine, melatonin, and nitric oxide. This cycle impacts mood, blood flow, sleep, and neurotransmitter balance.

3. 🥬The Folate Cycle: Converts folate into 5-MTHF, the active methyl donor. This is where MTHFR lives and where methylation begins.

4. 🔥The Methionine Cycle: Produces SAMe, the body’s universal methyl donor. It supports DNA methylation, hormone detox, and inflammation control.

5. 🛡️The Transsulfuration Cycle: Converts homocysteine into glutathione (your master antioxidant). This cycle is critical for detox, redox balance, and immune health.

Each cycle is nutrient-dependent and tightly interconnected. If one slows, the whole system struggles.

And when that happens?

Methylation dysfunction can manifest as everything from mood disorders and hormonal chaos to cardiovascular issues, chemical sensitivities, or autoimmune diseases.

What’s Coming in This Series

Over the next several articles, I will break down these five cycles in plain English with diagrams, clinical pearls, and real-world examples to help you connect the dots.

We’ll start with the🔥Methionine Cycle, where the real work of methylation happens. The body creates SAMe, one of the most important molecules for mood, detox, and DNA repair.

👉 If you’re a practitioner, this series will sharpen your clinical lens.

👉 If you’re a patient or a curious learner, it may finally explain the symptoms no one else has been able to connect.

🔓 Let’s unlock methylation.

📘From the author of Methylation Unlocked: The Missing Link to Health, Hormones, and Healing—coming soon.